Dashboard

Interactive exploration with `CellInteractomeR`

An R package CellInteractomeR has a built-in GUI dashboard which allows users to explore their own knowledge graph in interactive way. You can install the package & run the GUI dashboard with just few commands as follows.

# install package
devtools::install_github("gagliani-lab/Cell-Interactome")
library(CellInteractomeR)

# connect database
con = connect_database(
   url = "http://localhost:7474",
   username = "neo4j",
   password = "yourpassword"
)

# get thresholds & configuration
config = dashboard_config(con)
threshold = default_threshold(con)

# it opens the dashboard in your environment
run_dashboard(con, config, threshold)

How to use the dashboard

Single-entity

Multi-entity

Find path

Path search